Outstanding Undergraduate Researcher (OUR) Prize

AY2006/07

Winners - Faculty of Engineering

 

Yee De Biao
 
 
 
 
 
 
 
 
 
Project Title:
Optimizing Patterning Efficiency of Encoded Microbeads in a Microfluidic
 

Abstract:

Microfluidic systems are widely used for application in biological assays as they provide many advantages. However, patterning of microbeads in a microfluidic device has not been done before, especially with a specific aim of enabling multiplex biological assays to be performed in the device.

In this project, bead based bioassays were performed using encoded microbeads on a microfluidic device. The microfluidic device was fabricated using soft lithography techniques to obtain very unique done-shape structures . The structures allowed the encoded beads to be patterned orderly unto the device, facilitating individual analysis of beads and enabling bioassays to be multiplexed.

The protocols to efficiently pattern the microbeads unto the array in the device and performing bead based bioassays were optimized. This led to reduced total analysis time and the reagent volume used in the experiments. Also, 3D computer simulation software FLUENT and GAMBIT were used to study the effect of the device design on the patterning of microbeads and how changes to the design may affect the patterning of the encoded microbeads.

All these leads to enhance the advantages of microfluidic device and provides many potential applications in the area of cell-based, protein, DNA and RNA assays.

 

 

Sim Soon Leng, Anthony
 
 
 
 
 
 
 
Project Title:
Bead Based Bioassay
 

Abstract:

Identifying soluble molecules like protein and DNA in biological fluid is very important for biomedical research and medical diagnosis. Currently, there are many platforms available commercially. However, all of them pose one or more significant limitations  like long incubation time and limited multiplexing capabilities. In this project, the objective is to develop a bead based bioassay in a microfluidic device to address most of the issues. Besides having multiplexing capabilities, it is cheap, simple, highly sensitive and has high throughput. Also, performing a bead based bioassay in a microfluidic device would reduce the total assay time and amount of reagents needed.

The bead based competitive bioassay proved to be a highly sensitive platform, bringing the limit of detection down to 1nM, which is around 10 times better than conventional methods like PCR. Also,  bead based experiments performed in a microfluidic device have significantly reduced the hybridization time from 1 hour to 15 minutes and the volume of target needed from 100µl to 30µl. Multiplexing tests were also demonstrated in the microfluidic device. These experiments have shown that a bead based bioassay performed in a microfluidic device has many advantages as mentioned above. Certainly, it is able to address many problems faced by current detecting platforms.

 

 

Ng Wanting
 
 
 
 
 
 
 
Project Title:
Removal of Heavy Metals(Lead, Zinc & Cadmium) from Contaminated Water using a Novel Adsorbent
 

Abstract:

Water pollution, caused by toxic heavy metals, has been a major cause of concern due to their potential environmental and human health impacts. As a consequence, various environmental protection agencies have imposed more stringent environmental legislations on wastewater discharges. Removal of toxic metals from contaminated water samples through adsorption is considered to be a practical and effective treatment technology. However the commercially available adsorbents are expensive. In recent years, the search for low-cost adsorbents that have good metal-binding capacities has intesified.

 

 

 

 

 

 

 

 

G Vidhya
 
 
 
 
 
 
 
 
 
 
 
 
Project Title:
A 2-D Morphable Model Approach to Human Facial Expression Recognition
 

Abstract:

This project is a novel method to recognize human facial expressions using a 2D morphable model. In this method, a reference face model, is first synthesized, on which key feature points associated with expression-related deformations are marked (e.g. eye and lip boundaries). “Feature-based image metamorphosis” is used to mathematically measure feature point deformations from the neutral face to all the expressive faces in a database of 3D expressive faces and to train the system. As the facial deformations associated with the different expressions are distinct, the morphing parameters associated with each expression are unique. These morphing parameters are used for expression recognition and classification and we demonstrate that the morphing parameters associated with various expressions can be distinctly clustered in the expression space. Expression recognition for novel faces is then performed by measuring the displacement of the key feature points from the neutral face to any novel expressive face and comparing the morphing parameters so obtained with those of the prototypical expressions. The system was found to successfully classify four (Angry, Sad, Happy, Surprise) out of the six prototypical expressions (Angry, Sad, Happy, Surprise, Fear, Disgust) with an average successful recognition rate of 84.88% for supervised learning and 78.5% for unsupervised learning. The proposed approach is less expensive than 3D-based morphing in terms of computational time and resources required and can also be used for pose-invariant expression recognition when a 3D face database is used. Also, unlike the traditional Active Appearance Model-based approach where feature points need to be marked for all faces, our approach requires marking of feature points only on the reference neutral face model.